Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs62084586 chr17:56419228 T/C 0.000111 281 26.2 23.95 7.98 KM Plot
KIRP rs62097059 chr18:71830685 G/A 1.49E-10 283 25.97 23.1 9 KM Plot
KIRP rs62126489 chr19:33248184 A/T 1.85E-8 280 25.97 26.1 8.07 KM Plot
KIRP rs62247195 chr3:67982810 G/A 4.15E-13 285 26 26.4 13.17 KM Plot
KIRP rs62247216 chr3:67991756 T/C 3.65E-13 287 26 26.4 13.17 KM Plot
KIRP rs62247245 chr3:68005615 G/T 3.77E-13 282 25.93 23.43 13.17 KM Plot
KIRP rs62247776 chr3:67966281 T/C 9.2E-14 284 26.2 25.35 13.17 KM Plot
KIRP rs62248219 chr3:68025422 A/G 3.41E-6 284 26.8 20 13.17 KM Plot
KIRP rs62248962 chr3:42936739 G/A 0.000158 284 26.28 22.47 21.17 KM Plot
KIRP rs62284969 chr3:197160599 A/T 0.000134 287 24.8 26.83 19.9 KM Plot
KIRP rs62299838 chr4:5541402 C/A 0.000187 284 25.62 26.37 12.93 KM Plot
KIRP rs62393867 chr5:178175136 G/A 1.55E-6 280 26.48 22.6 10.3 KM Plot
KIRP rs62393868 chr5:178175388 A/G 1.53E-6 281 26.48 23.23 10.3 KM Plot
KIRP rs62463189 chr7:52339112 C/A 0.000114 285 26.77 19.9 19.9 KM Plot
KIRP rs628908 chr1:210428002 C/T 3.89E-6 289 23.4 34.3 13.17 KM Plot